- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.77 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x CMP: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE(Non-covalent)
- 3 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 4 residues within 4Å:- Chain B: G.5, A.6, H.7, E.8
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:A.6, B:H.7, B:E.8
- Salt bridges: B:H.7
SO4.5: 8 residues within 4Å:- Chain C: G.1, H.2, M.3, T.4, G.5, A.6, H.7, E.8
9 PLIP interactions:9 interactions with chain C- Hydrogen bonds: C:G.1, C:G.1, C:M.3, C:T.4, C:G.5, C:A.6, C:H.7, C:E.8
- Salt bridges: C:H.7
SO4.8: 8 residues within 4Å:- Chain E: G.1, H.2, M.3, T.4, G.5, A.6, H.7, E.8
9 PLIP interactions:9 interactions with chain E- Hydrogen bonds: E:G.1, E:G.1, E:M.3, E:T.4, E:G.5, E:A.6, E:H.7, E:E.8
- Salt bridges: E:H.7
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Amjadi, R. et al., Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes. Int J Mol Sci (2024)
- Release Date
- 2024-09-18
- Peptides
- Nucleoside diphosphate kinase 3: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.77 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x CMP: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE(Non-covalent)
- 3 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Amjadi, R. et al., Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes. Int J Mol Sci (2024)
- Release Date
- 2024-09-18
- Peptides
- Nucleoside diphosphate kinase 3: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F