SMTL ID : 8qzj.4 (3 other biounits)

Crystal structure of PptT-ADP from Mycobacterium tuberculosis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x A3P: ADENOSINE-3'-5'-DIPHOSPHATE(Non-covalent)

A3P.1: 20 residues within 4Å: Chain A: R.68, F.72, V.75, R.76, K.95, K.98, G.99, E.100, P.101, L.111, T.112, H.113, D.134, A.135, Y.180, K.181, F.184, P.185 Ligands: MN.2, MN.3 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:T.112, A:H.113, A:Y.180 Water bridges: A:R.68, A:R.68, A:H.113, A:A.135, A:A.135, A:E.136, A:K.181 Salt bridges: A:R.68, A:R.76, A:K.95, A:H.113, A:H.113, A:K.181

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 5 residues within 4Å: Chain A: D.134, A.135, E.136, E.177 Ligands: A3P.1 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.134, H2O.1, H2O.1, H2O.1, H2O.1 MN.3: 2 residues within 4Å: Chain A: H.113 Ligands: A3P.1 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.113, A:H.113, H2O.1, H2O.2, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gavalda, S. et al., Catalytic Cycle of Type II 4'-Phosphopantetheinyl Transferases. Acs Catalysis (2024)

Release Date

2024-06-19

Peptides

4'-phosphopantetheinyl transferase PptT: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

4'-phosphopantetheinyl transferase PptT

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