SMTL ID : 8r1g.1

Dimeric ternary structure of E6AP-E6-p53

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-mer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain B: C.218, N.220, C.221, C.251, C.254 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.218, B:C.221, B:C.251, B:C.254 ZN.2: 5 residues within 4Å: Chain B: C.145, Y.147, C.148, C.178, C.181 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.145, B:C.148, B:C.178, B:C.181 ZN.3: 5 residues within 4Å: Chain C: C.200, H.203, C.262, N.263, C.266 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.200, C:H.203, C:C.262, C:C.266 ZN.4: 5 residues within 4Å: Chain E: C.218, N.220, C.221, C.251, C.254 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:C.218, E:C.221, E:C.251, E:C.254 ZN.5: 5 residues within 4Å: Chain E: C.145, Y.147, C.148, C.178, C.181 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:C.145, E:C.148, E:C.178, E:C.181 ZN.6: 5 residues within 4Å: Chain F: C.200, H.203, C.262, N.263, C.266 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:C.200, F:H.203, F:C.262, F:C.266

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sandate, C.R. et al., Structural insights into viral hijacking of p53 by E6 and E6AP. Biorxiv (2023)

Release Date

2023-12-06

Peptides

Ubiquitin-protein ligase E3A: AD
Ubiquitin-like protein SMT3,Protein E6: BE
Cellular tumor antigen p53: CF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
D

B
B

E
E

C
C

F
F

Ubiquitin-protein ligase E3A

Ubiquitin-like protein SMT3,Protein E6

Cellular tumor antigen p53

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