SMTL ID : 8r1r.1

Structure of the Diels Alderase TedJ, in complex with cofactor FAD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.59 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 31 residues within 4Å: Chain A: V.27, G.28, G.30, P.31, T.32, D.51, R.52, R.53, P.61, G.62, Q.63, A.64, Q.119, H.141, E.142, V.143, A.174, D.175, G.176, T.180, V.200, R.280, F.282, G.301, D.302, P.309, G.311, G.312, R.314, L.315, C.318 28 PLIP interactions: 28 interactions with chain A Hydrophobic interactions: A:P.61, A:V.200, A:F.282, A:P.309 Hydrogen bonds: A:G.30, A:T.32, A:T.32, A:T.32, A:R.52, A:R.52, A:Q.63, A:A.64, A:A.64, A:Q.119, A:Q.119, A:V.143, A:V.143, A:T.180, A:D.302, A:R.314, A:R.314, A:R.314, A:L.315 Water bridges: A:G.33, A:G.176, A:T.180, A:D.302, A:S.316 FAD.2: 31 residues within 4Å: Chain B: V.27, G.28, G.30, P.31, T.32, D.51, R.52, R.53, P.61, G.62, Q.63, A.64, Q.119, H.141, E.142, V.143, A.174, D.175, G.176, T.180, V.200, R.280, F.282, G.301, D.302, P.309, G.311, G.312, R.314, L.315, C.318 27 PLIP interactions: 27 interactions with chain B Hydrophobic interactions: B:P.61, B:V.200, B:F.282, B:P.309 Hydrogen bonds: B:G.30, B:T.32, B:T.32, B:T.32, B:R.52, B:R.52, B:Q.63, B:A.64, B:A.64, B:Q.119, B:Q.119, B:V.143, B:V.143, B:T.180, B:D.302, B:R.314, B:R.314, B:R.314, B:L.315 Water bridges: B:G.33, B:G.176, B:T.180, B:S.316

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Russell, J. et al., The Diels-Alderase TedJ: Structure, Function and as a Biocatalyst for the Total Synthesis of the Antibiotic (-)-13-Deoxytetrodecamycin. To Be Published

Release Date

2024-11-13

Peptides

Short-chain dehydrogenase/reductase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Short-chain dehydrogenase/reductase