SMTL ID : 8r40.1

Crystal structure of diabody CR57 in complex with rabies virus protein G domain III

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-2-2-mer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: Q.170, H.171, P.172, G.173, K.174 Chain B: Q.42, G.45, Q.46 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:G.173, A:K.174, B:G.45 GOL.2: 6 residues within 4Å: Chain A: L.48, E.49, W.50 Chain B: V.231, V.232, F.233 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:W.50, B:F.233, B:F.233 GOL.3: 5 residues within 4Å: Chain B: S.132, A.133, T.135, T.153, G.154 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.132, B:T.135, B:G.154 GOL.4: 6 residues within 4Å: Chain B: A.61, Y.63, Q.68 Chain D: A.93, M.94, Q.95 6 PLIP interactions: 2 interactions with chain B, 4 interactions with chain D Hydrogen bonds: B:A.61, B:Q.68, D:A.93, D:Q.95, D:Q.95, D:Q.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kedari, A. et al., Structural insight into rabies virus neutralization revealed by an engineered antibody scaffold. Structure (2024)

Release Date

2024-11-06

Peptides

Homospecific Diabody CR57: AB
Glycoprotein: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
R

B
A

C
G

D
C

Homospecific Diabody CR57

Glycoprotein

Related Entries With Identical Sequence