SMTL ID : 8r50.1

Mouse teneurin-3 compact dimer - A1B1 isoform

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

8 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: Y.1246, N.1249, T.1262, D.1263, S.1264 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 4 residues within 4Å: Chain A: T.1344, N.1345, N.1355, L.1356 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 5 residues within 4Å: Chain A: R.1410, N.1440, T.1442, Q.1449, L.1451 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 4 residues within 4Å: Chain A: N.1969, S.1971, S.1972, Q.2038 No protein-ligand interaction detected (PLIP) NAG-NAG.5: 5 residues within 4Å: Chain B: Y.1246, N.1249, T.1262, D.1263, S.1264 No protein-ligand interaction detected (PLIP) NAG-NAG.6: 4 residues within 4Å: Chain B: T.1344, N.1345, N.1355, L.1356 No protein-ligand interaction detected (PLIP) NAG-NAG.7: 5 residues within 4Å: Chain B: R.1410, N.1440, T.1442, Q.1449, L.1451 No protein-ligand interaction detected (PLIP) NAG-NAG.8: 4 residues within 4Å: Chain B: N.1969, S.1971, S.1972, Q.2038 No protein-ligand interaction detected (PLIP)

16 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)

NAG.9: 3 residues within 4Å: Chain A: D.1230, I.1231, N.1232 Ligand excluded by PLIP NAG.10: 2 residues within 4Å: Chain A: N.1382, F.1389 Ligand excluded by PLIP NAG.11: 2 residues within 4Å: Chain A: N.1525, T.1527 Ligand excluded by PLIP NAG.12: 3 residues within 4Å: Chain A: N.1626, E.2247, G.2248 Ligand excluded by PLIP NAG.13: 2 residues within 4Å: Chain A: A.1828, N.1829 Ligand excluded by PLIP NAG.14: 6 residues within 4Å: Chain A: N.2278, G.2279, N.2281, Q.2304, F.2305, G.2306 Ligand excluded by PLIP NAG.15: 3 residues within 4Å: Chain A: N.581, Y.592, E.616 Ligand excluded by PLIP NAG.16: 2 residues within 4Å: Chain A: N.558, P.897 Ligand excluded by PLIP NAG.17: 3 residues within 4Å: Chain B: D.1230, I.1231, N.1232 Ligand excluded by PLIP NAG.18: 2 residues within 4Å: Chain B: N.1382, F.1389 Ligand excluded by PLIP NAG.19: 2 residues within 4Å: Chain B: N.1525, T.1527 Ligand excluded by PLIP NAG.20: 3 residues within 4Å: Chain B: N.1626, E.2247, G.2248 Ligand excluded by PLIP NAG.21: 2 residues within 4Å: Chain B: A.1828, N.1829 Ligand excluded by PLIP NAG.22: 6 residues within 4Å: Chain B: N.2278, G.2279, N.2281, Q.2304, F.2305, G.2306 Ligand excluded by PLIP NAG.23: 3 residues within 4Å: Chain B: N.581, Y.592, E.616 Ligand excluded by PLIP NAG.24: 2 residues within 4Å: Chain B: N.558, P.897 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gogou, C. et al., Alternative splicing controls teneurin-3 compact dimer formation for neuronal recognition. Nat Commun (2024)

Release Date

2024-05-08

Peptides

Teneurin-3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Teneurin-3

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