SMTL ID : 8r6b.1

DTX1 WWE domain in complex with ADP bound to WWE2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 9 residues within 4Å: Chain A: W.92, Y.102, F.128, Y.130, Q.139, N.141, T.144, R.146, R.148 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:Y.130, A:Q.139, A:Q.139, A:N.141, A:T.144, A:T.144 Water bridges: A:R.148, A:R.148, A:R.148 Salt bridges: A:R.146, A:R.148 pi-Stacking: A:W.92, A:W.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Munzker, L. et al., A ligand discovery toolbox for the WWE domain family of human E3 ligases. Commun Biol (2024)

Release Date

2024-07-31

Peptides

E3 ubiquitin-protein ligase DTX1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase DTX1

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