SMTL ID : 8r7z.1 (2 other biounits)

transcription factor BARHL2 homodimer with spacing four bp

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.26 Å

Oligo State

monomer

Ligands

1 x DC- DT- DA- DA- DA- DC- DG- DG- DT: DNA (5'-D(P*CP*TP*AP*AP*AP*CP*GP*GP*T)-3')(Non-covalent)

DC-DT-DA-DA-DA-DC-DG-DG-DT.1: 18 residues within 4Å: Chain A: R.2, K.3, A.4, R.5, T.6, F.8, T.47, W.48, N.51 Ligands: DA-DC-DC-DG-DT-DT-DT-DA-DG.2, DA-DC-DC-DG-DT-DT-DT-DA-DG.2, DA-DC-DC-DG-DT-DT-DT-DA-DG.2, DA-DC-DC-DG-DT-DT-DT-DA-DG.2, DA-DC-DC-DG-DT-DT-DT-DA-DG.2, DA-DC-DC-DG-DT-DT-DT-DA-DG.2, DA-DC-DC-DG-DT-DT-DT-DA-DG.2, DA-DC-DC-DG-DT-DT-DT-DA-DG.2, DA-DC-DC-DG-DT-DT-DT-DA-DG.2 Protein-ligand interaction information (PLIP) not available

1 x DA- DC- DC- DG- DT- DT- DT- DA- DG: DNA (5'-D(P*AP*CP*CP*GP*TP*TP*TP*AP*G)-3')(Non-covalent)

DA-DC-DC-DG-DT-DT-DT-DA-DG.2: 18 residues within 4Å: Chain A: R.2, R.5, Y.25, V.28, R.31, K.46, Q.50, R.53, K.57 Ligands: DC-DT-DA-DA-DA-DC-DG-DG-DT.1, DC-DT-DA-DA-DA-DC-DG-DG-DT.1, DC-DT-DA-DA-DA-DC-DG-DG-DT.1, DC-DT-DA-DA-DA-DC-DG-DG-DT.1, DC-DT-DA-DA-DA-DC-DG-DG-DT.1, DC-DT-DA-DA-DA-DC-DG-DG-DT.1, DC-DT-DA-DA-DA-DC-DG-DG-DT.1, DC-DT-DA-DA-DA-DC-DG-DG-DT.1, DC-DT-DA-DA-DA-DC-DG-DG-DT.1 Protein-ligand interaction information (PLIP) not available

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 1 residues within 4Å: Chain A: Y.25 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Morgunova, E. et al., transcription factor BARHL2 homodimer with 4 bp spacing. To Be Published

Release Date

2024-12-04

Peptides

BarH-like 2 homeobox protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

BarH-like 2 homeobox protein

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