SMTL ID : 8rce.1

Crystal structure of PPAR alfa Ligand Binding Domain in complex with the ligand LBB78

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x WUE: (2~{S})-2-(4-naphthalen-1-ylphenoxy)-3-phenyl-propanoic acid(Non-covalent)

WUE.1: 18 residues within 4Å: Chain A: F.90, H.91, C.93, Q.94, S.97, Y.131, I.134, F.135, L.138, M.172, H.257, V.261, I.264, K.265, A.271, A.272, L.277, Y.281 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:F.90, A:F.90, A:Q.94, A:I.134, A:F.135, A:L.138, A:I.264, A:K.265, A:A.271 Hydrogen bonds: A:C.93, A:S.97, A:Y.281 Salt bridges: A:H.257

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Laghezza, A. et al., A chemical modification of a peroxisome proliferator-activated receptor pan agonist produced a shift to a new dual alpha/gamma partial agonist endowed with mitochondrial pyruvate carrier inhibition and antidiabetic properties. Eur.J.Med.Chem. (2024)

Release Date

2024-10-16

Peptides

Peroxisome proliferator-activated receptor alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peroxisome proliferator-activated receptor alpha