SMTL ID : 8rf3.1

Crystal structure of N-terminal SARS-CoV-2 nsp1 in complex with fragment hit 7G3 refined against the anomalous diffraction data

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.23 Å

Oligo State

monomer

Ligands

1 x 01: 2-(1-benzothiophen-3-yl)ethanoic acid

01.1: 7 residues within 4Å: Chain A: V.6, L.8, R.35, L.38, K.39, L.115, K.117 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:R.35, A:L.38, A:K.39, A:K.39, A:L.115, A:K.117 Salt bridges: A:K.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ma, S. et al., High-confidence placement of low-occupancy fragments into electron density using the anomalous signal of sulfur and halogen atoms. Acta Crystallogr D Struct Biol (2024)

Release Date

2024-06-19

Peptides

Host translation inhibitor nsp1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Host translation inhibitor nsp1

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