- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x MN: MANGANESE (II) ION(Non-covalent)
MN.1: 6 residues within 4Å:- Chain A: H.115, D.138, D.142, D.246
- Ligands: MN.2, 01.3
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:H.115, A:D.138, A:D.142, A:D.246
MN.2: 6 residues within 4Å:- Chain A: D.138, H.140, D.246, D.248
- Ligands: MN.1, 01.3
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:D.138, A:H.140, A:D.246, A:D.248, A:D.248
MN.4: 5 residues within 4Å:- Chain B: H.115, D.138, D.142, D.246
- Ligands: MN.5
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:H.115, B:D.138, B:D.142, B:D.246
MN.5: 5 residues within 4Å:- Chain B: D.138, H.140, D.246, D.248
- Ligands: MN.4
5 PLIP interactions:5 interactions with chain B- Metal complexes: B:D.138, B:H.140, B:D.246, B:D.248, B:D.248
MN.6: 6 residues within 4Å:- Chain C: H.115, D.138, D.142, D.246
- Ligands: MN.7, 01.8
4 PLIP interactions:4 interactions with chain C- Metal complexes: C:H.115, C:D.138, C:D.142, C:D.246
MN.7: 6 residues within 4Å:- Chain C: D.138, H.140, D.246, D.248
- Ligands: MN.6, 01.8
5 PLIP interactions:5 interactions with chain C- Metal complexes: C:D.138, C:H.140, C:D.246, C:D.248, C:D.248
- 2 x 01: [(5~{S})-5-azanyl-4-[[[(2~{S})-2-azanyl-3-methyl-butanoyl]amino]methyl]-6-oxidanyl-6-oxidanylidene-hexyl]-$l^{3}-oxidanyl-bis(oxidanyl)boron
01.3: 17 residues within 4Å:- Chain A: H.115, D.138, H.140, D.142, N.144, S.151, H.155, G.156, D.195, D.197, E.200, D.246, D.248, T.260, E.291
- Ligands: MN.1, MN.2
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:N.144, A:S.151, A:D.197, A:D.197, A:T.260, A:T.260
- Water bridges: A:D.142, A:S.151, A:G.156, A:G.156
01.8: 17 residues within 4Å:- Chain C: H.115, D.138, H.140, D.142, N.144, S.151, H.155, G.156, D.195, D.197, E.200, D.246, D.248, T.260, E.291
- Ligands: MN.6, MN.7
10 PLIP interactions:10 interactions with chain C- Hydrogen bonds: C:N.144, C:S.151, C:D.197, C:D.197, C:T.260, C:E.291
- Water bridges: C:D.142, C:G.156, C:G.156, C:T.260
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shields, J.D. et al., Design and Synthesis of Acyclic Boronic Acid Arginase Inhibitors. J.Med.Chem. (2024)
- Release Date
- 2024-11-27
- Peptides
- Arginase-2, mitochondrial: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x 01: [(5~{S})-5-azanyl-4-[[[(2~{S})-2-azanyl-3-methyl-butanoyl]amino]methyl]-6-oxidanyl-6-oxidanylidene-hexyl]-$l^{3}-oxidanyl-bis(oxidanyl)boron
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shields, J.D. et al., Design and Synthesis of Acyclic Boronic Acid Arginase Inhibitors. J.Med.Chem. (2024)
- Release Date
- 2024-11-27
- Peptides
- Arginase-2, mitochondrial: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C