SMTL ID : 8rkq.1 (1 other biounit)

Structure of human DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE (ALDH4A1) complexed with the molecular tweezer CLR01

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

1 x 9SZ: (1R,5S,9S,16R,20R,24S,28S,35R)-3,22-Bis(dihydroxyphosphoryloxy)tridecacyclo[22.14.1.15,20.19,16.128,35.02,23.04,21.06,19.08,17.010,15.025,38.027,36.029,34]dotetraconta-2(23),3,6,8(17),10,12,14,18,21,25,27(36),29,31,33,37-pentadecaene(Non-covalent)

9SZ.1: 10 residues within 4Å: Chain A: H.20, M.21, L.26, R.27, S.191, P.193, P.194, S.195, H.555, K.556 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.26, A:P.193, A:P.193, A:P.194, A:K.556 Salt bridges: A:R.27 pi-Cation interactions: A:K.556

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Porfetye, A.T. et al., How Do Molecular Tweezers Bind to Proteins? Lessons from X-ray Crystallography. Molecules (2024)

Release Date

2024-05-08

Peptides

Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial

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