SMTL ID : 8rok.1 (1 other biounit)

Human cohesin SMC3-HD(EQ)/RAD21-N complex - ATP-Mg-bound conformation - Form 1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

hetero-1-1-mer

Ligands

1 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER

AGS.1: 17 residues within 4Å: Chain A: R.12, S.13, R.33, N.34, G.35, S.36, G.37, K.38, S.39, N.40, A.63, L.65, H.66, E.67, Q.389, F.420 Ligands: MG.2 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:N.34, A:G.35, A:G.35, A:S.36, A:G.37, A:K.38, A:S.39, A:S.39, A:N.40, A:N.40, A:L.65, A:E.67 Water bridges: A:K.38, A:D.388 Salt bridges: A:K.38

1 x MG: MAGNESIUM ION

MG.2: 2 residues within 4Å: Chain A: S.39 Ligands: AGS.1 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:S.39, H2O.1, H2O.2, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vitoria Gomes, M. et al., The cohesin ATPase cycle is mediated by specific conformational dynamics and interface plasticity of SMC1A and SMC3 ATPase domains. Cell Rep (2024)

Release Date

2024-09-11

Peptides

Structural maintenance of chromosomes protein 3: A
Double-strand-break repair protein rad21 homolog: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Structural maintenance of chromosomes protein 3

Double-strand-break repair protein rad21 homolog

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