SMTL ID : 8rom.1

Crystal structure of human FAD synthase PAPS domain in complex with FAD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 23 residues within 4Å: Chain A: G.51, F.52, N.53, D.57, C.58, L.83, Y.84, I.85, M.116, L.120, V.133, L.134, M.135, G.136, T.137, Y.143, T.153, D.154, W.157, F.160, R.162, G.197, S.198 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:L.120, A:L.120, A:V.133 Hydrogen bonds: A:G.51, A:N.53, A:I.85, A:I.85, A:G.136, A:D.154, A:D.154, A:R.162, A:S.198 Water bridges: A:D.57, A:D.57, A:D.57, A:C.58 pi-Stacking: A:W.157, A:W.157, A:W.157

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 8 residues within 4Å: Chain A: N.53, G.55, K.56, D.57, Y.189, S.195, L.196, G.197 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:K.56, A:D.57, A:D.57, A:Y.189, A:S.195, A:S.195, A:S.195, A:L.196 Water bridges: A:G.55, A:D.57, A:D.57 Salt bridges: A:K.56 PO4.3: 2 residues within 4Å: Chain A: R.126, H.127 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.126, A:R.126 Salt bridges: A:R.126, A:H.127

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Leo, G. et al., Structural insights into the bifunctional enzyme human FAD synthase. Structure (2024)

Release Date

2024-04-10

Peptides

FAD synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

FAD synthase