SMTL ID : 8rqo.1

Human thyroid hormone receptor alpha ligand binding domain in complex with beta-selective agonist ALG-055009

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.74 Å

Oligo State

monomer

Ligands

1 x 01: 6-azanyl-2-[3,5-bis(chloranyl)-4-[(6-oxidanylidene-5-propan-2-yl-1~{H}-pyridazin-3-yl)oxy]phenyl]-1,2,4-triazine-3,5-dione

01.1: 21 residues within 4Å: Chain A: F.89, F.92, T.93, I.95, I.96, A.99, R.102, V.103, M.130, M.133, R.136, A.137, R.140, T.149, L.150, S.151, G.164, L.166, I.173, H.255, F.275 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:F.89, A:F.92, A:T.93, A:I.96, A:A.99, A:M.133, A:L.150, A:L.166 Hydrogen bonds: A:A.99, A:R.102, A:R.136, A:R.140, A:R.140, A:S.151, A:H.255

1 x SO4: SULFATE ION

SO4.2: 4 residues within 4Å: Chain A: Q.29, R.31, H.236, P.239 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.236 Water bridges: A:W.238, A:W.238 Salt bridges: A:R.31, A:H.236

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vandyck, K. et al., Discovery and Preclinical Profile of ALG-055009, a Potent and Selective Thyroid Hormone Receptor Beta (THR-beta ) Agonist for the Treatment of MASH. J.Med.Chem. (2024)

Release Date

2024-09-11

Peptides

Isoform Alpha-1 of Thyroid hormone receptor alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Isoform Alpha-1 of Thyroid hormone receptor alpha