SMTL ID : 8ru8.1

A crystal form of a human CDK2-CDK7 chimera

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.51 Å

Oligo State

monomer

Ligands

1 x I74: (3R,4R)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidin-3-ol(Non-covalent)

I74.1: 20 residues within 4Å: Chain A: E.16, L.18, G.19, E.20, G.21, V.26, A.39, I.72, F.88, E.89, F.90, L.91, H.92, Q.93, D.94, N.139, N.140, L.142, A.152, D.153 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.18, A:L.18, A:V.26, A:A.39, A:F.88, A:F.88, A:F.90, A:A.152 Hydrogen bonds: A:L.18, A:L.91, A:L.91, A:N.139 Water bridges: A:D.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mukherjee, M. et al., Protein engineering enables a soakable crystal form of human CDK7 primed for high-throughput crystallography and structure-based drug design. Structure (2024)

Release Date

2024-06-26

Peptides

Cyclin-dependent kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cyclin-dependent kinase 2