SMTL ID : 8s1p.1

YlmH bound to PtRNA-50S

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY 1.96 Å
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
1 x UNK- UNK- UNK- UNK: Nascent chain(Non-functional Binders)
4 x ZN: ZINC ION(Non-covalent)
47 x K: POTASSIUM ION(Non-functional Binders)(Non-covalent)
1 x CLM: CHLORAMPHENICOL(Non-functional Binders)
158 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Takada, H. et al., A role for the S4-domain containing protein YlmH in ribosome-associated quality control in Bacillus subtilis. Nucleic Acids Res. (2024)
Release Date
2024-06-12
Peptides
50S ribosomal protein L35: A
50S ribosomal protein L36: B
50S ribosomal protein L31: C
50S ribosomal protein L2: F
50S ribosomal protein L3: G
50S ribosomal protein L4: H
50S ribosomal protein L5: I
Large ribosomal subunit protein uL6: J
50S ribosomal protein L13: K
50S ribosomal protein L14: L
50S ribosomal protein L15: M
50S ribosomal protein L16: N
50S ribosomal protein L17: O
50S ribosomal protein L18: P
50S ribosomal protein L19: Q
Large ribosomal subunit protein bL20: R
50S ribosomal protein L21: S
50S ribosomal protein L22: T
Large ribosomal subunit protein uL23: U
50S ribosomal protein L24: V
Large ribosomal subunit protein bL27: W
50S ribosomal protein L28: X
50S ribosomal protein L29: Y
Large ribosomal subunit protein uL30: Z
Putative RNA-binding protein YlmH: 0
50S ribosomal protein L32: 2
50S ribosomal protein L33 1: 3
50S ribosomal protein L34: 4
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
3
B
4
C
6
F
C
G
D
H
E
I
F
J
G
K
J
L
K
M
L
N
M
O
N
P
O
Q
P
R
Q
S
R
T
S
U
T
V
U
W
W
X
X
Y
Y
Z
Z
0
V
2
0
3
1
4
2

50S ribosomal protein L35

50S ribosomal protein L36

50S ribosomal protein L31

50S ribosomal protein L2

50S ribosomal protein L3

50S ribosomal protein L4

50S ribosomal protein L5

Large ribosomal subunit protein uL6

50S ribosomal protein L13

50S ribosomal protein L14

50S ribosomal protein L15

50S ribosomal protein L16

50S ribosomal protein L17

50S ribosomal protein L18

50S ribosomal protein L19

Large ribosomal subunit protein bL20

50S ribosomal protein L21

50S ribosomal protein L22

Large ribosomal subunit protein uL23

50S ribosomal protein L24

Large ribosomal subunit protein bL27

50S ribosomal protein L28

50S ribosomal protein L29

Large ribosomal subunit protein uL30

Putative RNA-binding protein YlmH

50S ribosomal protein L32

50S ribosomal protein L33 1

50S ribosomal protein L34

Related Entries With Identical Sequence

3j3v.1 | 3j3w.1 | 3j9w.1 | 5njt.1 | 6ha1.1 | 6ha8.1 | 6htq.1 | 6ppf.1 | 6ppk.1 | 6pvk.1 | 6tnn.1 | 6tpq.1 | 7aqc.1 | 7aqd.1 | 7as8.1 | 7as9.1 | 7o5b.1 | 7ope.1 | 7qgu.1 | 7qh4.1 | 7qv1.1 | 7qv2.1 | 7qv3.1 | 7s9u.1 | 7sae.1 | 8buu.1 | 8qcq.1 | 8qpp.1 | 8r55.1 | 8s1u.1