SMTL ID : 8s1v.1

Crystal structure of full-lenght Renilla reniformis green fluorescent protein (GFP)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

homo-dimer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: K.106, S.107, D.108, N.119, D.121 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.108 Water bridges: A:Y.91, A:S.107 GOL.2: 6 residues within 4Å: Chain A: Q.98, H.170 Chain B: Y.149, N.151, I.156, R.176 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:Q.98, A:H.170, B:Y.149, B:Y.149, B:R.176 GOL.3: 5 residues within 4Å: Chain B: K.106, S.107, D.108, N.119, D.121 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.108 Water bridges: B:Y.91, B:S.107 GOL.4: 6 residues within 4Å: Chain A: Y.149, N.151, I.156, R.176 Chain B: Q.98, H.170 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:Y.149, A:R.176, B:Q.98, B:H.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Marek, M. et al., Crystal structure of full-lenght Renilla reniformis green fluorescent protein (GFP). To Be Published

Release Date

2025-09-03

Peptides

Green fluorescent protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
E

Green fluorescent protein

Related Entries With Identical Sequence