SMTL ID : 8s5w.1

Cryo-EM structure of fedratinib-bound human SLC19A3 in inward-open state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.05 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 2TA: N-tert-butyl-3-{[5-methyl-2-({4-[2-(pyrrolidin-1-yl)ethoxy]phenyl}amino)pyrimidin-4-yl]amino}benzenesulfonamide

2TA.1: 16 residues within 4Å: Chain B: M.27, R.29, E.32, L.35, F.56, W.59, W.94, L.97, V.109, E.110, Y.113, Y.151, N.293, L.296, N.297, Q.300 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:E.32, B:L.35, B:W.94, B:L.97, B:Y.113, B:Y.113, B:Y.151 Hydrogen bonds: B:E.32, B:E.110, B:Y.113, B:Y.113 pi-Stacking: B:F.56, B:W.59, B:Y.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gabriel, F. et al., Structural basis of thiamine transport and drug recognition by SLC19A3. Nat Commun (2024)

Release Date

2024-10-02

Peptides

Nb3.7: A
Thiamine transporter 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Membrane

We predict this structure to be a membrane protein.
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Nb3.7

Thiamine transporter 2

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