SMTL ID : 8s97.1

C143W variant of Citrate Synthase (CitA) in Mycobacterium tuberculosis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: Y.169, A.173, G.212, V.302, A.306, F.324 No protein-ligand interaction detected (PLIP) EDO.2: 2 residues within 4Å: Chain A: E.142, W.143 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.142, A:E.142 EDO.3: 5 residues within 4Å: Chain A: P.67, A.68, V.117, R.149, R.153 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.68, A:R.149, A:R.153 EDO.4: 5 residues within 4Å: Chain A: D.79, R.81, S.207, N.318, P.321 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.81, A:N.318 EDO.5: 6 residues within 4Å: Chain B: Y.169, A.173, G.212, V.302, A.306, F.324 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Y.169 EDO.6: 2 residues within 4Å: Chain B: E.142, W.143 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.142 EDO.7: 5 residues within 4Å: Chain B: P.67, A.68, V.117, R.149, R.153 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:A.68, B:R.149, B:R.153 EDO.8: 5 residues within 4Å: Chain B: D.79, R.81, S.207, N.318, P.321 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.81, B:N.318

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pathirage, R. et al., Mycobacterium tuberculosis CitA activity is modulated by cysteine oxidation and pyruvate binding. Rsc Med Chem (2023)

Release Date

2023-06-07

Peptides

citrate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

citrate synthase