SMTL ID : 8sca.1

Rec3 Domain from S. pyogenes Cas9

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.67 Å

Oligo State

monomer

Ligands

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: Y.22, K.59, Y.99, L.112, D.113, N.114, E.115 Ligands: EDO.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.22, A:K.59, A:D.113 EDO.2: 6 residues within 4Å: Chain A: L.19, Y.22, E.115, L.185, K.189 Ligands: EDO.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.115, A:K.189 EDO.3: 4 residues within 4Å: Chain A: T.60, N.61, R.62, K.63 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.62, A:K.63, A:K.63 EDO.4: 2 residues within 4Å: Chain A: K.41 Ligands: EDO.5 No protein-ligand interaction detected (PLIP) EDO.5: 4 residues within 4Å: Chain A: M.39, R.40, K.41 Ligands: EDO.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.40, A:K.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Skeens, E. et al., High-fidelity, hyper-accurate, and evolved mutants rewire atomic-level communication in CRISPR-Cas9. Sci Adv (2024)

Release Date

2024-03-13

Peptides

CRISPR-associated endonuclease Cas9/Csn1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

CRISPR-associated endonuclease Cas9/Csn1