SMTL ID : 8sfu.2 (1 other biounit)

Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with naringin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.1: 15 residues within 4Å: Chain A: G.24, N.27, Y.274, G.278, S.279, S.305, F.324, I.325, Q.327, H.340, G.342, S.343, N.344, S.345, E.348 29 PLIP interactions: 29 interactions with chain A Hydrogen bonds: A:N.27, A:Y.274, A:S.279, A:S.279, A:S.279, A:S.305, A:I.325, A:I.325, A:Q.327, A:Q.327, A:S.343, A:N.344, A:N.344, A:S.345, A:E.348 Water bridges: A:G.24, A:G.24, A:G.24, A:G.278, A:L.280, A:V.328, A:V.328, A:H.340, A:H.340, A:H.340, A:S.345 Salt bridges: A:H.340, A:H.340 pi-Stacking: A:F.324

1 x ZWN: (2S)-5-hydroxy-2-(4-hydroxyphenyl)-4-oxo-3,4-dihydro-2H-1-benzopyran-7-yl 2-O-(6-deoxy-alpha-L-mannopyranosyl)-beta-D-glucopyranoside(Non-covalent)

ZWN.2: 14 residues within 4Å: Chain A: F.21, M.78, I.85, A.86, A.89, R.92, T.110, F.111, G.113, M.114, L.142, L.280, A.281, F.362 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.21, A:I.85, A:A.86, A:A.89, A:M.114, A:L.280, A:F.362, A:F.362 Hydrogen bonds: A:R.92 Water bridges: A:G.113, A:A.281 pi-Stacking: A:F.362

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arriaza, R.H. et al., Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with naringin. To Be Published

Release Date

2023-09-13

Peptides

UDP-glycosyltransferase 202A2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

UDP-glycosyltransferase 202A2

Related Entries With Identical Sequence