SMTL ID : 8skr.1

human liver mitochondrial Aspartate aminotransferase

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Non-covalent)

PLP.1: 16 residues within 4Å: Chain A: S.133, G.134, T.135, W.162, H.165, H.210, N.215, D.243, A.245, Y.246, S.276, A.278, K.279, R.287 Chain B: Y.96, S.317 16 PLIP interactions: 13 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:W.162, A:N.215, A:A.245 Hydrogen bonds: A:S.133, A:G.134, A:T.135, A:N.215, A:Y.246, A:S.276, A:S.276, A:K.279, B:Y.96, B:S.317, B:S.317 Salt bridges: A:K.279, A:R.287 PLP.2: 16 residues within 4Å: Chain A: Y.96, S.317 Chain B: S.133, G.134, T.135, W.162, H.165, H.210, N.215, D.243, A.245, Y.246, S.276, A.278, K.279, R.287 16 PLIP interactions: 13 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:W.162, B:N.215, B:A.245 Hydrogen bonds: B:S.133, B:G.134, B:T.135, B:N.215, B:Y.246, B:S.276, B:S.276, B:K.279, A:Y.96, A:S.317, A:S.317 Salt bridges: B:K.279, B:R.287

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z. et al., High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology. Mol.Cell Proteomics (2023)

Release Date

2024-02-21

Peptides

Aspartate aminotransferase, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Aspartate aminotransferase, mitochondrial