SMTL ID : 8su2.1

F96H epi-Isozizaene Synthase: complex with 3 Mg2+ and risedronate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.33 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.184, H.185, R.241, K.242 7 PLIP interactions: 7 interactions with chain A Water bridges: A:H.185, A:H.185, A:R.241 Salt bridges: A:R.184, A:H.185, A:R.241, A:K.242

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: Y.84, G.358, M.361, S.364, W.365, P.372, Y.373 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.358, A:S.364

1 x RIS: 1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID(Non-covalent)

RIS.3: 16 residues within 4Å: Chain A: F.116, H.117, D.120, Y.193, R.215, T.218, F.219, N.261, S.265, K.268, E.269, R.359, Y.360 Ligands: MG.4, MG.5, MG.6 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.116 Hydrogen bonds: A:D.120, A:R.215, A:R.215, A:N.261, A:N.261, A:S.265, A:K.268, A:K.268, A:R.359 Water bridges: A:D.120, A:Y.193

3 x MG: MAGNESIUM ION(Non-covalent)

MG.4: 5 residues within 4Å: Chain A: R.215, N.261, S.265, E.269 Ligands: RIS.3 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.265, A:E.269, H2O.3 MG.5: 5 residues within 4Å: Chain A: D.120, K.268, R.359 Ligands: RIS.3, MG.6 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.120, H2O.2, H2O.4, H2O.6 MG.6: 4 residues within 4Å: Chain A: D.120, Y.193 Ligands: RIS.3, MG.5 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.120, H2O.1, H2O.1, H2O.2, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eaton, S.A. et al., Reprogramming the Cyclization Cascade of epi -Isozizaene Synthase to Generate Alternative Terpene Products. Biochemistry (2023)

Release Date

2023-07-26

Peptides

Epi-isozizaene synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epi-isozizaene synthase

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