SMTL ID : 8swb.1

RNase H complex with streopure ASO and RNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: R.21, R.39, S.148, E.149 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.21, A:R.21, A:R.39, A:R.39, A:E.149

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 2 residues within 4Å: Chain A: R.17, R.18 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.14, A:R.18 Water bridges: A:S.14, A:R.19 Salt bridges: A:R.17

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 3 residues within 4Å: Chain C: C.10, C.11, X.12 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Iwamoto, N. et al., Crystal structure of RNase H/RNA/PS-ASO complex at an atomic level. To Be Published

Release Date

2024-05-22

Peptides

Ribonuclease H1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribonuclease H1