SMTL ID : 8t5p.2 (1 other biounit)

SARS-CoV-2 ORF3a peptide in complex with TRAF3 TRAF domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-trimer

Ligands

1 x PRO- ILE- GLN- ALA- SER: ORF3a protein(Non-covalent)

PRO-ILE-GLN-ALA-SER.1: 10 residues within 4Å: Chain A: D.87, F.98, S.142, S.143, S.144, I.154, A.155, S.156, G.157, P.159 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.98, A:I.154, A:P.159 Hydrogen bonds: A:D.87, A:S.143, A:S.144, A:A.155, A:G.157

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Busscher, B.M. et al., SARS-CoV-2 ORF3a-Mediated NF-kappa B Activation Is Not Dependent on TRAF-Binding Sequence. Viruses (2023)

Release Date

2023-11-29

Peptides

TNF receptor-associated factor 3: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

TNF receptor-associated factor 3

Related Entries With Identical Sequence