SMTL ID : 8t5r.1

SOS2 crystal structure with fragment bound (compound 13)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 8 residues within 4Å: Chain A: V.138, E.139, H.140, H.141, F.142, Y.143, K.181, Q.241 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.140, A:F.142, A:Y.143, A:Q.241 Salt bridges: A:K.181 SO4.2: 4 residues within 4Å: Chain A: P.62, V.65, N.132, H.136 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.132 Salt bridges: A:H.136

1 x 6LH: 4-(aminomethyl)benzene-1-sulfonamide(Non-covalent)

6LH.3: 10 residues within 4Å: Chain A: V.319, N.320, Y.325, L.327, D.328, F.331, R.339, L.342, D.343, V.346 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.325 Hydrogen bonds: A:N.320, A:D.328 pi-Stacking: A:F.331

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smith, C.R. et al., Discovery of Five SOS2 Fragment Hits with Binding Modes Determined by SOS2 X-Ray Cocrystallography. J.Med.Chem. (2024)

Release Date

2024-01-10

Peptides

Son of sevenless homolog 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Son of sevenless homolog 2

Related Entries With Identical Sequence