SMTL ID : 8t79.1

SpRY-Cas9:gRNA complex bound to non-target DNA with 10 bp R-loop

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x DG- DA- DG- DC- DA- DG- DA- DG- DA: NTS(Non-covalent)

DG-DA-DG-DC-DA-DG-DA-DG-DA.1: 18 residues within 4Å: Chain A: R.1112, K.1116, L.1133, W.1134, P.1135, S.1214, Q.1217, A.1318, R.1335 Chain C: T.1, C.2, T.3, C.4, T.5, G.6, C.7, T.8, C.9 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.1106, A:S.1107, A:D.1330 Salt bridges: A:R.1109, A:K.1151, A:K.1332

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hibshman, G.N. et al., Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9. Nat Commun (2024)

Release Date

2024-05-08

Peptides

CRISPR-associated endonuclease Cas9/Csn1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CRISPR-associated endonuclease Cas9/Csn1