SMTL ID : 8tb7.1

Cryo-EM Structure of GPR61-

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x ZOB: 6-{[(3,5-difluoropyridin-4-yl)methyl]amino}-N-(4-ethoxy-6-methylpyrimidin-2-yl)-2-methoxy-N-(2-methoxyethyl)pyridine-3-sulfonamide(Non-covalent)

ZOB.1: 21 residues within 4Å: Chain A: I.145, N.146, R.149, V.153, I.233, V.236, Y.237, M.240, A.366, V.368, V.369, L.370, A.372, V.373, Q.376, F.421, Y.422, L.425, N.426, R.427, Q.428 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.368, A:V.369, A:V.369, A:A.372, A:V.373, A:L.425 Hydrogen bonds: A:N.146, A:R.149, A:R.149, A:N.426 Halogen bonds: A:N.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lees, J.A. et al., An inverse agonist of orphan receptor GPR61 acts by a G protein-competitive allosteric mechanism. Nat Commun (2023)

Release Date

2023-10-04

Peptides

G-protein coupled receptor 61,Soluble cytochrome b562: A
Fab24 BAK5 heavy chain: B
Fab hinge-binding nanobody: C
Fab24 BAK5 light chain: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
R

B
H

C
N

D
L

Membrane

We predict this structure to be a membrane protein.
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G-protein coupled receptor 61,Soluble cytochrome b562

Fab24 BAK5 heavy chain

Fab hinge-binding nanobody

Fab24 BAK5 light chain