SMTL ID : 8tdx.2 (1 other biounit)

TRNM-b.01 in complex with HIV Env fusion peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ALA- VAL- GLY- ILE- GLY- ALA- VAL- PHE: Env Fusion Peptide(Non-covalent)

ALA-VAL-GLY-ILE-GLY-ALA-VAL-PHE.1: 17 residues within 4Å: Chain A: D.32, D.91, Y.92, F.94 Chain B: R.30, V.31, G.32, S.33, Y.34, Y.35, Y.54, R.101, Y.102, V.103, D.104, H.105, R.110 21 PLIP interactions: 18 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:Y.34, B:H.105, A:F.94 Hydrogen bonds: B:R.30, B:V.31, B:V.31, B:S.33, B:S.33, B:Y.35, B:Y.54, B:Y.54, B:Y.54, B:R.101, B:R.101, B:V.103, B:V.103, B:H.105, B:W.106, A:D.91, A:D.91 Water bridges: B:R.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, H. et al., Broad and potent HIV-1 neutralization in fusion peptide-primed SHIV-boosted macaques. To Be Published

Release Date

2024-07-10

Peptides

TRNM-b.01 Fab Light Chain: A
TRNM-b.01 Fab Heavy Chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
B

TRNM-b.01 Fab Light Chain

TRNM-b.01 Fab Heavy Chain

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