SMTL ID : 8tfq.2 (1 other biounit)

Fab from C10-S66K antibody in complex with fentanyl

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 7V7: N-phenyl-N-[1-(2-phenylethyl)piperidin-4-yl]propanamide(Non-covalent)

7V7.1: 18 residues within 4Å: Chain A: Q.88, S.89, A.90, F.94, T.95, Y.96, P.97 Chain B: W.34, W.48, E.51, I.57, T.58, N.59, E.99, V.101, G.106, Y.107, F.108 11 PLIP interactions: 6 interactions with chain B, 5 interactions with chain A Hydrophobic interactions: B:W.34, B:W.34, B:N.59, B:F.108, B:F.108, A:A.90, A:F.94, A:P.97, A:P.97 Salt bridges: B:E.51 pi-Cation interactions: A:F.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eubanks, L.M. et al., An Engineered Human-Antibody Fragment with Fentanyl Pan-Specificity That Reverses Carfentanil-Induced Respiratory Depression. Acs Chem Neurosci (2023)

Release Date

2023-08-16

Peptides

Light chain from Fab of C10_S66K antibody: A
Heavy chain from Fab of C10_S66K antibody: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

Light chain from Fab of C10_S66K antibody

Heavy chain from Fab of C10_S66K antibody

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