SMTL ID : 8th9.1

Structure of mammalian NEIL2 from Monodelphis domestica in complex with THF-containing DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.240, H.244, C.264, C.267 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.240, A:H.244, A:C.264, A:C.267

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 3 residues within 4Å: Chain A: F.88 Chain B: T.8, G.9 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eckenroth, B.E. et al., Structural and biochemical insights into NEIL2's preference for abasic sites. Nucleic Acids Res. (2023)

Release Date

2023-11-01

Peptides

DNA-(apurinic or apyrimidinic site) lyase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA-(apurinic or apyrimidinic site) lyase