SMTL ID : 8thr.1

Structure of the human vesicular monoamine transporter 2 (VMAT2) bound to tetrabenazine in an occluded conformation

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x EBZ: (3S,5R,11bS)-9,10-dimethoxy-3-(2-methylpropyl)-1,3,4,6,7,11b-hexahydro-2H-pyrido[2,1-a]isoquinolin-2-one(Non-covalent)

EBZ.1: 14 residues within 4Å: Chain A: L.300, V.303, V.304, F.398, R.452, V.495, I.571, E.575, F.597, A.600, S.601, I.658, F.692, Y.696 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.300, A:F.398, A:V.495, A:I.571, A:F.597, A:A.600, A:I.658, A:Y.696 Hydrogen bonds: A:R.452, A:R.452, A:Y.696 Salt bridges: A:E.575

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dalton, M.P. et al., Structural mechanisms for VMAT2 inhibition by tetrabenazine. Elife (2024)

Release Date

2023-10-25

Peptides

fluorescent protein mVenus,Synaptic vesicular amine transporter,GFP nano body,Synaptic vesicular amine transporter,Synaptic vesicular amine transporter: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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fluorescent protein mVenus,Synaptic vesicular amine transporter,GFP nano body,Synaptic vesicular amine transporter,Synaptic vesicular amine transporter