SMTL ID : 8tld.1

Structure of the IL-5 Signaling Complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-1-mer

Ligands

5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain B: N.36, T.38, L.39, Q.66 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:L.39 Hydrogen bonds: B:N.36, B:T.38, B:Q.66, B:Q.66 NAG.2: 2 residues within 4Å: Chain E: N.23, K.39 3 PLIP interactions: 3 interactions with chain E Hydrophobic interactions: E:K.39 Hydrogen bonds: E:N.23, E:K.39 NAG.3: 3 residues within 4Å: Chain E: V.118, N.119, L.146 2 PLIP interactions: 2 interactions with chain E Hydrophobic interactions: E:V.118, E:L.146 NAG.4: 5 residues within 4Å: Chain E: F.158, Y.160, L.202, N.204, G.205 2 PLIP interactions: 2 interactions with chain E Hydrophobic interactions: E:F.158 Hydrogen bonds: E:Y.160 NAG.5: 3 residues within 4Å: Chain E: L.231, N.232, E.247 2 PLIP interactions: 2 interactions with chain E Hydrophobic interactions: E:L.231 Hydrogen bonds: E:E.247

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Caveney, N.A. et al., Organizing structural principles of common beta family signaling. To Be Published

Release Date

2024-04-10

Peptides

Cytokine receptor common subunit beta: AD
Interleukin-5: BC
Interleukin-5 receptor subunit alpha: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

D
E

B
C

C
D

E
F

Cytokine receptor common subunit beta

Interleukin-5

Interleukin-5 receptor subunit alpha