SMTL ID : 8tn9.1

Structural architecture of the acidic region of the B domain of coagulation factor V

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 5 residues within 4Å: Chain A: P.137, P.138, F.179, E.249, N.269 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:F.179 NAG.2: 4 residues within 4Å: Chain A: H.1729, S.1732, N.1982, D.2005 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.1732, A:N.1982 NAG.3: 3 residues within 4Å: Chain A: A.1636, P.1674, N.1675 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:P.1674 NAG.4: 4 residues within 4Å: Chain A: M.203, V.210, N.211, Q.289 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mohammed, B.M. et al., Structural architecture of the acidic region of the B domain of coagulation factor V. J.Thromb.Haemost. (2024)

Release Date

2023-10-04

Peptides

Coagulation factor V: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Coagulation factor V

Related Entries With Identical Sequence