- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-2-10-11-1-1-1-1-mer
- Ligands
- 24 x CYC: PHYCOCYANOBILIN(Covalent)
- 1 x 45D: beta,beta-carotene-4,4'-dione(Non-covalent)
45D.2: 38 residues within 4Å:- Chain B: E.34, L.37, A.38, I.40, W.41, A.43, Y.44, M.47, T.52, I.53, A.54, A.55, P.56, A.58, A.59, T.80, M.83, C.84, N.104, L.107, G.108, W.110, Y.111, L.113, G.114, M.117, I.125, P.126, Y.129, I.151, L.154, R.155, E.174, V.176, V.177
- Chain L: P.68, G.69, Y.73
28 PLIP interactions:25 interactions with chain B, 3 interactions with chain L- Hydrophobic interactions: B:E.34, B:L.37, B:L.37, B:L.37, B:A.38, B:I.40, B:I.40, B:W.41, B:Y.44, B:A.54, B:A.55, B:A.58, B:T.80, B:L.107, B:L.107, B:L.107, B:W.110, B:W.110, B:L.113, B:I.125, B:Y.129, B:Y.129, B:I.151, B:L.154, B:V.177, L:P.68, L:Y.73
- Hydrogen bonds: L:G.69
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sauer, P.V. et al., Structural and quantum chemical basis for OCP-mediated quenching of phycobilisomes. Sci Adv (2024)
- Release Date
- 2024-04-17
- Peptides
- Phycobiliprotein ApcE: A
Orange carotenoid-binding protein: B
Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core: CQ
Allophycocyanin alpha chain: DFHJLNTVXZ
Allophycocyanin beta chain: EGIKMOSUWY0
Phycobilisome rod-core linker polypeptide CpcG: P
Allophycocyanin subunit alpha-B: R
Allophycocyanin subunit beta-18: 1
Translation initiation factor IF-2: 2 - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CQ
cD
DF
FH
HJ
JL
LN
NT
fV
hX
jZ
lE
EG
GI
IK
KM
MO
OS
eU
gW
iY
k0
mP
PR
d1
o2
p
SMTL ID : 8to2.1
Bottom cylinder of high-resolution phycobilisome quenched by OCP (local refinement)
Phycobiliprotein ApcE
Orange carotenoid-binding protein
Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core
Toggle Identical (CQ)Allophycocyanin alpha chain
Toggle Identical (DFHJLNTVXZ)Allophycocyanin beta chain
Toggle Identical (EGIKMOSUWY0)Phycobilisome rod-core linker polypeptide CpcG
Allophycocyanin subunit alpha-B
Allophycocyanin subunit beta-18
Translation initiation factor IF-2
Related Entries With Identical Sequence
3jbb.1 | 4po5.1 | 4po5.2 | 7sc7.1 | 7sc7.2 | 7sc7.3 | 7sc7.4 | 7sc7.5 | 7sc7.6 | 7sc7.7 | 7sc7.8 | 7sc7.9 | 7sc7.10 | 7sc7.11 | 7sc7.12 | 7sc7.13 | 7sc7.14 | 7sc7.15 | 7sc7.16 | 7sc7.17 | 7sc7.18 | 7sc7.19 | 7sc7.20 | 7sc7.21 | 7sc7.22 | 7sc7.23 | 7sc7.24 | 7sc7.25 | 7sc7.26 | 7sc7.27 more...less...7sc7.28 | 7sc7.29 | 7sc7.30 | 7sc7.31 | 7sc7.32 | 7sc7.33 | 7sc7.34 | 7sc7.35 | 7sc7.36 | 7sc7.37 | 7sc7.38 | 7sc7.39 | 7sc7.40 | 7sc7.41 | 7sc7.42 | 7sc7.43 | 7sc7.44 | 7sc7.45 | 7sc7.46 | 7sc7.47 | 7sc7.48 | 7sc7.49 | 7sc7.50 | 7sc7.51 | 7sc7.52 | 7sc7.53 | 7sc7.54 | 7sc7.55 | 7sc7.56 | 7sc7.57 | 7sc7.58 | 7sc7.59 | 7sc7.60 | 7sc7.61 | 7sc7.62 | 7sc7.63 | 7sc7.64 | 7sc7.65 | 7sc7.66 | 7sc7.67 | 7sc7.68 | 7sc7.69 | 7sc7.70 | 7sc7.71 | 7sc7.72 | 7sc7.73 | 7sc7.74 | 7sc7.75 | 7sc7.76 | 7sc7.77 | 7sc7.78 | 7sc7.79 | 7sc7.80 | 7sc7.81 | 7sc7.82 | 7sc7.83 | 7sc7.84 | 7sc7.85 | 7sc7.86 | 7sc8.1 | 7sca.1 | 7scb.1 | 7scc.1 | 7zxv.1 | 8tpj.1 | 8tro.1