SMTL ID : 8toq.1

ACE2-peptide 1 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.73 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.73 NAG.2: 4 residues within 4Å: Chain A: S.403, D.526, S.528, N.529 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.403, A:S.403, A:S.403, A:N.529 NAG.3: 3 residues within 4Å: Chain A: Q.64, Q.84, N.86 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.64, A:N.86

1 x ZN: ZINC ION(Non-covalent)

ZN.4: 3 residues within 4Å: Chain A: H.357, H.361, E.385 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.357, A:H.361, A:E.385, A:E.385

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 4 residues within 4Å: Chain A: R.152, W.460, W.461, D.482 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bedding, M.J. et al., Discovery of High Affinity Cyclic Peptide Ligands for Human ACE2 with SARS-CoV-2 Entry Inhibitory Activity. Acs Chem.Biol. (2024)

Release Date

2024-02-07

Peptides

Angiotensin-converting enzyme 2: A
Peptide 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
E

Angiotensin-converting enzyme 2

Peptide 1

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