SMTL ID : 8tr9.1

Cryo-EM structure of transglutaminase 2 bound to GDP

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 12 residues within 4Å: Chain A: F.174, R.476, I.477, R.478, V.479, S.482, M.483, R.580, D.581, L.582, Y.583, E.585 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:S.171, A:I.477, A:V.479, A:S.482, A:M.483, A:R.580, A:Y.583, A:Y.583 Salt bridges: A:R.476, A:R.478, A:R.580, A:R.580, A:E.585 pi-Stacking: A:F.174 pi-Cation interactions: A:F.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Aplin, C. et al., Conformational activation and inhibition of transglutaminase 2 determined by static and time resolved small-angle X-ray scattering and cryoelectron microscopy. To Be Published

Release Date

2024-07-31

Peptides

Protein-glutamine gamma-glutamyltransferase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein-glutamine gamma-glutamyltransferase 2

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