SMTL ID : 8ttc.1 (1 other biounit)

Structure of retromer VPS29-VPS35 (483-796) complexed with Fam21A repeat 20 (1289-1302)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.01 Å

Oligo State

hetero-1-1-mer

Ligands

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 2 residues within 4Å: Chain A: A.121, E.175 No protein-ligand interaction detected (PLIP) CIT.4: 2 residues within 4Å: Chain B: D.22, D.24 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.24 Salt bridges: B:K.76

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 1 residues within 4Å: Chain B: N.228 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.228

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guo, Q. et al., Structural basis for coupling of the WASH subunit FAM21 with the endosomal SNX27-Retromer complex. Proc.Natl.Acad.Sci.USA (2024)

Release Date

2024-08-21

Peptides

Vacuolar protein sorting-associated protein 29: A
Vacuolar protein sorting-associated protein 35: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Vacuolar protein sorting-associated protein 29

Vacuolar protein sorting-associated protein 35

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