SMTL ID : 8ttm.1

IgG1 Fc Heterodimer combYSelect1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.51 Å

Oligo State

hetero-1-1-mer

Ligands

2 x NAG- NAG- BMA- MAN- NAG- MAN- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.1: 14 residues within 4Å: Chain A: V.25, F.26, F.28, K.31, T.45, V.49, D.50, Q.80, Y.81, N.82, T.84, R.86, K.119 Ligands: NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.2 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.81, A:N.82 Hydrogen bonds: A:Q.80, A:K.31, A:K.31 NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.2: 11 residues within 4Å: Chain B: F.26, F.28, K.31, T.45, V.49, D.50, Q.80, N.82, T.84, R.86 Ligands: NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.1 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Azzam, T. et al., Combinatorially restricted computational design of protein-protein interfaces to produce IgG heterodimers. Sci Adv (2024)

Release Date

2024-06-26

Peptides

Immunoglobulin gamma-1 heavy chain: A
Immunoglobulin gamma-1 heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Immunoglobulin gamma-1 heavy chain

Immunoglobulin gamma-1 heavy chain

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