SMTL ID : 8tvi.1

Langya Virus G glycoprotein (LayV G) with stabilizing mutations

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.181 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.181 NAG.3: 1 residues within 4Å: Chain B: N.181 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.181 NAG.5: 1 residues within 4Å: Chain C: N.181 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:N.181 NAG.7: 1 residues within 4Å: Chain D: N.181 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:N.181

4 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: H.186, D.536, A.538, H.540 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.186, A:D.536, A:D.536, A:H.540 ZN.4: 4 residues within 4Å: Chain B: H.186, D.536, A.538, H.540 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.186, B:D.536, B:D.536, B:H.540 ZN.6: 4 residues within 4Å: Chain C: H.186, D.536, A.538, H.540 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:H.186, C:D.536, C:D.536, C:H.540 ZN.8: 4 residues within 4Å: Chain D: H.186, D.536, A.538, H.540 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:H.186, D:D.536, D:D.536, D:H.540

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Z. et al., Structure and design of Langya virus glycoprotein antigens. Proc.Natl.Acad.Sci.USA (2024)

Release Date

2024-05-01

Peptides

Langya virus attachment glycoprotein G: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Langya virus attachment glycoprotein G