SMTL ID : 8u1g.2 (1 other biounit)

Prefusion-stabilized SARS-CoV-2 S2 subunit

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-trimer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: K.125, D.126, N.131 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.125, A:N.131, A:S.133 NAG.2: 3 residues within 4Å: Chain B: K.125, D.126, N.131 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.125, B:N.131, B:S.133 NAG.3: 3 residues within 4Å: Chain C: K.125, D.126, N.131 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:K.125, C:N.131, C:S.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hsieh, C.-L. et al., Structure of prefusion-stabilized SARS-CoV-2 S2-only antigen. To Be Published

Release Date

2024-01-24

Peptides

Spike protein S2: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

Spike protein S2

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