- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-3-3-3-mer
- Ligands
- 6 x CLR: CHOLESTEROL(Non-covalent)
- 3 x D21: (2R)-1-(hexadecanoyloxy)-3-(phosphonooxy)propan-2-yl (9Z)-octadec-9-enoate(Non-covalent)
D21.2: 13 residues within 4Å:- Chain C: N.51, F.54, I.62, L.308, F.311
- Chain I: T.297, K.300, W.301, I.304
- Ligands: CLR.3, D21.5, D21.8, CLR.9
12 PLIP interactions:6 interactions with chain I, 6 interactions with chain C- Hydrophobic interactions: I:W.301, I:W.301, I:I.304, C:F.54, C:I.62, C:L.308, C:F.311
- Hydrogen bonds: I:T.297, I:T.297, C:N.51, C:F.54
- Salt bridges: I:K.300
D21.5: 13 residues within 4Å:- Chain C: T.297, K.300, W.301, I.304
- Chain F: N.51, F.54, I.62, L.308, F.311
- Ligands: D21.2, CLR.3, CLR.6, D21.8
12 PLIP interactions:6 interactions with chain C, 6 interactions with chain F- Hydrophobic interactions: C:W.301, C:W.301, C:I.304, F:F.54, F:I.62, F:L.308, F:F.311
- Hydrogen bonds: C:T.297, C:T.297, F:N.51, F:F.54
- Salt bridges: C:K.300
D21.8: 13 residues within 4Å:- Chain F: T.297, K.300, W.301, I.304
- Chain I: N.51, F.54, I.62, L.308, F.311
- Ligands: D21.2, D21.5, CLR.6, CLR.9
12 PLIP interactions:6 interactions with chain I, 6 interactions with chain F- Hydrophobic interactions: I:F.54, I:I.62, I:L.308, I:F.311, F:W.301, F:W.301, F:I.304
- Hydrogen bonds: I:N.51, I:F.54, F:T.297, F:T.297
- Salt bridges: F:K.300
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Saotome, K. et al., Structural insights into CXCR4 modulation and oligomerization. Nat.Struct.Mol.Biol. (2024)
- Release Date
- 2024-03-13
- Peptides
- REGN7663 Fab light chain: ADG
REGN7663 Fab heavy chain: BEH
C-X-C chemokine receptor type 4: CFI - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
LD
AG
EB
HE
BH
FC
RF
CI
G - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-3-3-3-mer
- Ligands
- 6 x CLR: CHOLESTEROL(Non-covalent)
- 3 x D21: (2R)-1-(hexadecanoyloxy)-3-(phosphonooxy)propan-2-yl (9Z)-octadec-9-enoate(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Saotome, K. et al., Structural insights into CXCR4 modulation and oligomerization. Nat.Struct.Mol.Biol. (2024)
- Release Date
- 2024-03-13
- Peptides
- REGN7663 Fab light chain: ADG
REGN7663 Fab heavy chain: BEH
C-X-C chemokine receptor type 4: CFI - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
LD
AG
EB
HE
BH
FC
RF
CI
G - Membrane
-
We predict this structure to be a membrane protein.