SMTL ID : 8uc8.1

HCN1 nanodisc

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

16 x PCW: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)

PCW.1: 17 residues within 4Å: Chain A: V.154, V.158, L.274, I.275, I.278, H.279, N.300, L.301, G.303, M.304, L.306, L.308, H.310, I.380, T.384, C.385 Ligands: PCW.2 Ligand excluded by PLIP PCW.2: 6 residues within 4Å: Chain A: I.275, L.308, D.312, V.381 Ligands: PCW.1, PCW.3 Ligand excluded by PLIP PCW.3: 7 residues within 4Å: Chain A: W.221, L.265, L.269, S.272, I.275, W.311 Ligands: PCW.2 Ligand excluded by PLIP PCW.4: 7 residues within 4Å: Chain A: I.380, T.384, M.388 Chain B: I.302, M.305, L.306, L.357 Ligand excluded by PLIP PCW.5: 17 residues within 4Å: Chain B: V.154, V.158, L.274, I.275, I.278, H.279, N.300, L.301, G.303, M.304, L.306, L.308, H.310, I.380, T.384, C.385 Ligands: PCW.6 Ligand excluded by PLIP PCW.6: 6 residues within 4Å: Chain B: I.275, L.308, D.312, V.381 Ligands: PCW.5, PCW.7 Ligand excluded by PLIP PCW.7: 7 residues within 4Å: Chain B: W.221, L.265, L.269, S.272, I.275, W.311 Ligands: PCW.6 Ligand excluded by PLIP PCW.8: 17 residues within 4Å: Chain C: V.154, V.158, L.274, I.275, I.278, H.279, N.300, L.301, G.303, M.304, L.306, L.308, H.310, I.380, T.384, C.385 Ligands: PCW.9 Ligand excluded by PLIP PCW.9: 6 residues within 4Å: Chain C: I.275, L.308, D.312, V.381 Ligands: PCW.8, PCW.10 Ligand excluded by PLIP PCW.10: 7 residues within 4Å: Chain C: W.221, L.265, L.269, S.272, I.275, W.311 Ligands: PCW.9 Ligand excluded by PLIP PCW.11: 7 residues within 4Å: Chain A: I.302, M.305, L.306, L.357 Chain C: I.380, T.384, M.388 Ligand excluded by PLIP PCW.12: 7 residues within 4Å: Chain C: I.302, M.305, L.306, L.357 Chain D: I.380, T.384, M.388 Ligand excluded by PLIP PCW.13: 7 residues within 4Å: Chain B: I.380, T.384, M.388 Chain D: I.302, M.305, L.306, L.357 Ligand excluded by PLIP PCW.14: 17 residues within 4Å: Chain D: V.154, V.158, L.274, I.275, I.278, H.279, N.300, L.301, G.303, M.304, L.306, L.308, H.310, I.380, T.384, C.385 Ligands: PCW.15 Ligand excluded by PLIP PCW.15: 6 residues within 4Å: Chain D: I.275, L.308, D.312, V.381 Ligands: PCW.14, PCW.16 Ligand excluded by PLIP PCW.16: 7 residues within 4Å: Chain D: W.221, L.265, L.269, S.272, I.275, W.311 Ligands: PCW.15 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, E.D. et al., Propofol rescues voltage-dependent gating of HCN1 channel epilepsy mutants. Nature (2024)

Release Date

2024-07-31

Peptides

Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
C

C
A

D
B

Membrane

We predict this structure to be a membrane protein.
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Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1

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