SMTL ID : 8uf4.1

Crystal structure of wildtype dystroglycan proteolytic domain (juxtamembrane domain)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.43 Å

Oligo State

hetero-2-2-mer

Ligands

1 x CA: CALCIUM ION

CA.1: 5 residues within 4Å: Chain A: N.4, Q.5, D.35, E.37, D.91 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:Q.5, A:D.35, A:D.35, A:E.37, H2O.1

2 x CL: CHLORIDE ION

CL.2: 2 residues within 4Å: Chain A: H.106, R.107 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain C: H.106, R.107 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Anderson, M.J.M. et al., Structural and Functional Analysis of Dystroglycan Cell Surface Cleavage Reveals a Novel Regulation Mechanism. To Be Published

Release Date

2024-09-11

Peptides

a-dystroglycan: AC
Beta-dystroglycan: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

a-dystroglycan

Beta-dystroglycan