- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-trimer
- Ligands
- 9 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 30 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.10: 3 residues within 4Å:- Chain A: Y.25, F.56, N.58
Ligand excluded by PLIPNAG.11: 4 residues within 4Å:- Chain A: K.110, T.111, E.129, N.161
Ligand excluded by PLIPNAG.12: 3 residues within 4Å:- Chain A: N.276, E.277, N.278
Ligand excluded by PLIPNAG.13: 1 residues within 4Å:- Chain A: N.327
Ligand excluded by PLIPNAG.14: 1 residues within 4Å:- Chain A: N.339
Ligand excluded by PLIPNAG.15: 3 residues within 4Å:- Chain A: N.612, T.614
- Chain B: Q.832
Ligand excluded by PLIPNAG.16: 3 residues within 4Å:- Chain A: N.705
- Chain B: I.790, Y.792
Ligand excluded by PLIPNAG.17: 3 residues within 4Å:- Chain A: A.702, E.1068, N.1070
Ligand excluded by PLIPNAG.18: 1 residues within 4Å:- Chain A: N.1130
Ligand excluded by PLIPNAG.19: 4 residues within 4Å:- Chain B: Y.25, T.26, N.27, N.58
Ligand excluded by PLIPNAG.20: 3 residues within 4Å:- Chain B: Q.112, E.129, N.161
Ligand excluded by PLIPNAG.21: 2 residues within 4Å:- Chain B: E.277, N.278
Ligand excluded by PLIPNAG.22: 1 residues within 4Å:- Chain B: N.327
Ligand excluded by PLIPNAG.23: 2 residues within 4Å:- Chain B: H.335, N.339
Ligand excluded by PLIPNAG.24: 3 residues within 4Å:- Chain B: N.612, T.614
- Chain C: Q.832
Ligand excluded by PLIPNAG.25: 3 residues within 4Å:- Chain B: N.705
- Chain C: I.790, Y.792
Ligand excluded by PLIPNAG.26: 2 residues within 4Å:- Chain B: A.702, N.1070
Ligand excluded by PLIPNAG.27: 1 residues within 4Å:- Chain B: N.1130
Ligand excluded by PLIPNAG.28: 3 residues within 4Å:- Chain A: E.461
- Chain B: T.105, N.230
Ligand excluded by PLIPNAG.29: 4 residues within 4Å:- Chain B: K.458, E.461
- Chain C: T.105, N.230
Ligand excluded by PLIPNAG.30: 3 residues within 4Å:- Chain A: T.105, N.230
- Chain C: K.458
Ligand excluded by PLIPNAG.31: 4 residues within 4Å:- Chain C: Y.25, N.27, F.56, N.58
Ligand excluded by PLIPNAG.32: 2 residues within 4Å:- Chain C: Q.112, N.161
Ligand excluded by PLIPNAG.33: 3 residues within 4Å:- Chain B: K.554
- Chain C: N.276, N.278
Ligand excluded by PLIPNAG.34: 1 residues within 4Å:- Chain C: N.327
Ligand excluded by PLIPNAG.35: 2 residues within 4Å:- Chain C: N.339, F.367
Ligand excluded by PLIPNAG.36: 2 residues within 4Å:- Chain C: N.612, T.614
Ligand excluded by PLIPNAG.37: 4 residues within 4Å:- Chain A: I.790, Y.792
- Chain C: N.705, I.1126
Ligand excluded by PLIPNAG.38: 3 residues within 4Å:- Chain C: A.702, E.1068, N.1070
Ligand excluded by PLIPNAG.39: 1 residues within 4Å:- Chain C: N.1130
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhang, Q.E. et al., SARS-CoV-2 Omicron-XBB.1.16 3-RBD down Spike Protein Trimer consensus (S-GSAS-Omicron-XBB.1.16). To Be Published
- Release Date
- 2024-06-12
- Peptides
- Spike glycoprotein: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-trimer
- Ligands
- 9 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 30 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhang, Q.E. et al., SARS-CoV-2 Omicron-XBB.1.16 3-RBD down Spike Protein Trimer consensus (S-GSAS-Omicron-XBB.1.16). To Be Published
- Release Date
- 2024-06-12
- Peptides
- Spike glycoprotein: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C