SMTL ID : 8uk6.1

Candida albicans glutaminyl tRNA synthetase (GLN4) in complex with N-pyrimidinyl-beta-thiophenylacrylamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.73 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.365, C.367, C.391, H.393 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.365, A:C.367, A:H.393

1 x WVK: (2E)-N-(pyrimidin-2-yl)-3-(thiophen-2-yl)prop-2-enamide(Non-covalent)

WVK.2: 12 residues within 4Å: Chain A: F.282, H.284, G.512, T.513, I.514, M.515, I.520, R.536, L.537, Y.538, T.539, F.720 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.520, A:Y.538, A:T.539 Hydrogen bonds: A:I.514, A:I.514, A:Y.538 pi-Stacking: A:H.284

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Puumala, E. et al., Allosteric inhibition of tRNA synthetase Gln4 by N-pyrimidinyl-beta-thiophenylacrylamides exerts highly selective antifungal activity. Cell Chem Biol (2024)

Release Date

2024-03-06

Peptides

glutamine--tRNA ligase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

glutamine--tRNA ligase