SMTL ID : 8uph.1

Prf state of Stigmatella aurantiaca bacteriophytochrome 2

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x BLA: BILIVERDINE IX ALPHA

BLA.1: 19 residues within 4Å: Chain A: C.13, I.18, Y.161, F.188, T.191, D.192, I.193, P.194, A.197, Y.201, R.239, V.241, S.242, I.244, H.245, Y.248, S.257, S.259, H.275 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:I.18, A:Y.161, A:F.188, A:F.188, A:D.192, A:I.193, A:P.194, A:A.197, A:Y.201, A:I.244, A:H.245, A:Y.248 Hydrogen bonds: A:D.192, A:S.242, A:H.245, A:S.257, A:S.259 Salt bridges: A:R.239, A:H.245 BLA.2: 20 residues within 4Å: Chain B: C.13, I.18, Y.161, F.188, T.191, D.192, I.193, P.194, Y.201, R.207, R.239, V.241, S.242, I.244, H.245, Y.248, S.257, S.259, A.273, H.275 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:I.18, B:Y.161, B:F.188, B:I.193, B:P.194, B:Y.201, B:I.244, B:H.245, B:Y.248 Hydrogen bonds: B:D.192, B:S.242, B:S.257, B:S.259, B:S.259 Salt bridges: B:R.239, B:H.245

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Malla, T.N. et al., Photoreception and signaling in bacterial phytochrome revealed by single-particle cryo-EM. Sci Adv (2024)

Release Date

2024-09-25

Peptides

Bacteriophytochrome (Light-regulated signal transduction histidine kinase): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bacteriophytochrome (Light-regulated signal transduction histidine kinase)

Related Entries With Identical Sequence