SMTL ID : 8urb.1

Porcine epidemic diarrhea virus complete core polymerase complex

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-2-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.290, C.296, C.301, C.305 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.290, A:C.296, A:C.301, A:C.305 ZN.2: 5 residues within 4Å: Chain A: C.482, Y.566, H.637, C.640, C.641 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.482, A:H.637, A:C.640, A:C.641

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Anderson, T.K. et al., An alphacoronavirus polymerase structure reveals conserved co-factor functions. Biorxiv (2023)

Release Date

2023-11-15

Peptides

nsp12: A
nsp8: BD
nsp7: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

D
D

C
C

nsp12

nsp8

nsp7