SMTL ID : 8uv3.1

Murine norovirus capsid protein + 1 mM MgCl2

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

homo-trimer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: Q.424, D.426, E.433 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.426, H2O.3 MG.2: 4 residues within 4Å: Chain B: Q.424, D.426, D.429, E.433 3 PLIP interactions: 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.426, H2O.4, H2O.8 MG.3: 4 residues within 4Å: Chain C: Q.424, D.426, A.431, E.433 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sherman, M. et al., The reversible activation of norovirus by metal ions. J.Virol. (2024)

Release Date

2024-01-17

Peptides

Capsid protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Capsid protein